Timing simulations for BufferedMatrixMethods 1.3.2 (Simulation 1)

Written by Ben Bolstad
email bmb@bmbolstad.com

Background

The goal here was to investigate the speed of BufferedMatrix.justRMA() as a function of the number of arrays processed between 10 and 2500 HGu-133 Plue 2.0 arrays

Source code (note takes very long time to run)

Results

Discussion

Over the range of the number of arrays used, performance was effectively linear in time needed to read in, compute RMA expression summaries and return these in a standard container.